Other

Part:BBa_K1559010:Design

Designed by: Xiuqi (Rex) Xia   Group: iGEM14_Toronto   (2014-10-13)

RFP-Targeting protospacer for CRISPR/Cas9 system


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Source

The protospacer + PAM in Part:BBa_J04450 was found by using the DNA 2.0 CRISPR gRNA design tool:

https://www.dna20.com/eCommerce/cas9/input

Settings:

  • Species: E. coli K12 MG1655
  • PAM: NGG
  • Choose Wild-type Cas9 instead of Nickase
  • gRNA offset: use default settings
  • Target a sequence: use sequence of Part:BBa_J04450

References